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SimpleSearchEngine Member List

This is the complete list of members for SimpleSearchEngine, including all inherited members.

computeHyperScore(double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum< Peak1D > &exp_spectrum, const MSSpectrum< RichPeak1D > &theo_spectrum)SimpleSearchEngineinlineprotected
deisotopeAndSingleChargeMSSpectrum(SpectrumType &in, Int min_charge, Int max_charge, double fragment_tolerance, bool fragment_unit_ppm, bool keep_only_deisotoped=false, Size min_isopeaks=3, Size max_isopeaks=10, bool make_single_charged=true)SimpleSearchEngineinlineprotectedstatic
getModifications_(StringList modNames)SimpleSearchEngineinlineprotected
logfactorial(UInt x)SimpleSearchEngineinlineprotected
main_(int, const char **)SimpleSearchEngineinlineprotected
postProcessHits_(const PeakMap &exp, const vector< vector< PeptideHit > > &peptide_hits, vector< ProteinIdentification > &protein_ids, vector< PeptideIdentification > &peptide_ids, Size top_hits)SimpleSearchEngineinlineprotected
preprocessSpectra_(PeakMap &exp, double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm)SimpleSearchEngineinlineprotected
registerOptionsAndFlags_()SimpleSearchEngineinlineprotected
SimpleSearchEngine()SimpleSearchEngineinline

OpenMS / TOPP release 2.0.0 Documentation generated on Thu Jul 28 2016 00:37:35 using doxygen 1.8.11