Tag Cannata10Specialization for ReducedAminoAcid#
Specialization for ReducedAminoAcid#
Defined in | seqan/reduced_aminoacid.h |
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Signature |
typedef Cannata10 Tag<Cannata10_>;
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Detailed Description
This is the 10-character reduction defined by Cannata et al, 2002, https://www.ncbi.nlm.nih.gov/pubmed/12176833
Since it was created from the 20-letter alphabet the clusters in SeqAn are not identical (they contain more symbols). This is the clustering:
'A', // A G S T X 'B', // B D N 'C', // C U 'E', // E Q Z 'F', // F Y * 'H', // H 'I', // I J L M V 'K', // K O R 'P', // P 'W' // W