ChromatogramExtractor parameters. More...
Public Attributes | |
double | min_upper_edge_dist |
Whether to not extract anything closer than this (in Da) from the upper edge. More... | |
double | mz_extraction_window |
Extraction window in Da or ppm (e.g. 50ppm means extraction +/- 25ppm) More... | |
bool | ppm |
Whether the extraction window is given in ppm or Da. More... | |
String | extraction_function |
The extraction function in mass space. More... | |
double | rt_extraction_window |
The retention time extraction window. More... | |
double | extra_rt_extract |
Whether to extract some extra in the retention time (can be useful if one wants to look at the chromatogram outside the window) More... | |
ChromatogramExtractor parameters.
A small helper struct to pass the parameters for the chromatogram extraction through to the actual algorithm.
double extra_rt_extract |
Whether to extract some extra in the retention time (can be useful if one wants to look at the chromatogram outside the window)
Referenced by OpenSwathWorkflow::prepare_coordinates_wrap().
String extraction_function |
The extraction function in mass space.
Referenced by OpenSwathWorkflow::performExtraction(), and OpenSwathWorkflow::simpleExtractChromatograms().
double min_upper_edge_dist |
Whether to not extract anything closer than this (in Da) from the upper edge.
Referenced by OpenSwathWorkflow::performExtraction(), and OpenSwathWorkflow::simpleExtractChromatograms().
double mz_extraction_window |
Extraction window in Da or ppm (e.g. 50ppm means extraction +/- 25ppm)
Referenced by OpenSwathWorkflow::performExtraction(), and OpenSwathWorkflow::simpleExtractChromatograms().
bool ppm |
Whether the extraction window is given in ppm or Da.
Referenced by OpenSwathWorkflow::performExtraction(), and OpenSwathWorkflow::simpleExtractChromatograms().
double rt_extraction_window |
The retention time extraction window.
Referenced by OpenSwathWorkflow::performExtraction(), OpenSwathWorkflow::prepare_coordinates_wrap(), and OpenSwathWorkflow::simpleExtractChromatograms().
OpenMS / TOPP release 2.0.0 | Documentation generated on Mon Feb 1 2016 12:49:50 using doxygen 1.8.10 |