|
void | registerOptionsAndFlags_ () override |
|
vector< ResidueModification > | getModifications_ (StringList modNames) |
|
void | preprocessSpectra_ (PeakMap &exp, double fragment_mass_tolerance, bool fragment_mass_tolerance_unit_ppm) |
|
void | postProcessHits_ (const PeakMap &exp, vector< vector< AnnotatedHit > > &annotated_hits, vector< ProteinIdentification > &protein_ids, vector< PeptideIdentification > &peptide_ids, Size top_hits, const vector< ResidueModification > &fixed_modifications, const vector< ResidueModification > &variable_modifications, Size max_variable_mods_per_peptide) |
|
ExitCodes | main_ (int, const char **) override |
|