+ exec + rm -rf /rpmbuild + mkdir -p /rpmbuild + su -c 'rpmbuild -ba /builddir/build/SPECS/fido-pi.spec --define "debug_package %{nil}" --undefine _annotated_build --define "_missing_doc_files_terminate_build %{nil}" --define "_emacs_sitestartdir /usr/share/emacs/site-lisp/site-start.d" --define "_emacs_sitelispdir /usr/share/emacs/site-lisp" --nocheck ' mockbuild Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.RhOTLm + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 + /usr/bin/unzip -qq /builddir/build/SOURCES/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3.zip + STATUS=0 + '[' 0 -ne 0 ']' + cd Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.3sLh8x + umask 022 + cd /builddir/build/BUILD + cd Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 ' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 ' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -- The C compiler identification is GNU 7.3.1 -- The CXX compiler identification is GNU 7.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAS_WALL -- Performing Test HAS_WALL - Success -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_SHARED_LIBS CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 + make -j4 V=1 /usr/bin/cmake -H/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 -B/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/CMakeFiles /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' make -f CMakeFiles/Fido.dir/build.make CMakeFiles/Fido.dir/depend make -f CMakeFiles/FidoChooseParameters.dir/build.make CMakeFiles/FidoChooseParameters.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' cd /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/CMakeFiles/Fido.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' cd /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3 /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/CMakeFiles/FidoChooseParameters.dir/DependInfo.cmake --color= Scanning dependencies of target FidoChooseParameters make[2]: Leaving directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' make -f CMakeFiles/FidoChooseParameters.dir/build.make CMakeFiles/FidoChooseParameters.dir/build Scanning dependencies of target Fido make[2]: Leaving directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' make -f CMakeFiles/Fido.dir/build.make CMakeFiles/Fido.dir/build make[2]: Entering directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' make[2]: Entering directory '/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3' [ 2%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/Set.cpp.o [ 5%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/mainFido_ChooseParameters.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/Set.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Set.cpp [ 8%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/Vector.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/mainFido_ChooseParameters.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/mainFido_ChooseParameters.cpp /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/Vector.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Vector.cpp [ 11%] Building CXX object CMakeFiles/Fido.dir/src/mainFido.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/mainFido.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/mainFido.cpp [ 13%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/Numerical.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/Numerical.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp: In member function 'bool Numerical::isDifferentSign(double, double) const': /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp:51:19: warning: suggest parentheses around '&&' within '||' [-Wparentheses] return isPos(a) && isNeg(b) || isNeg(a) && isPos(b); ~~~~~~~~~^~~~~~~~~~~ [ 16%] Building CXX object CMakeFiles/Fido.dir/src/Set.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/Set.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Set.cpp [ 19%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/Matrix.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/Matrix.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Matrix.cpp [ 22%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/GramSchmidt.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/GramSchmidt.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/GramSchmidt.cpp [ 25%] Building CXX object CMakeFiles/Fido.dir/src/Vector.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/Vector.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Vector.cpp [ 27%] Building CXX object CMakeFiles/Fido.dir/src/Numerical.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/Numerical.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp: In member function 'bool Numerical::isDifferentSign(double, double) const': /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Numerical.cpp:51:19: warning: suggest parentheses around '&&' within '||' [-Wparentheses] return isPos(a) && isNeg(b) || isNeg(a) && isPos(b); ~~~~~~~~~^~~~~~~~~~~ [ 30%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/LPSolver.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/LPSolver.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp [ 33%] Building CXX object CMakeFiles/Fido.dir/src/Matrix.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/Matrix.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Matrix.cpp [ 36%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/ForwardSampler.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/ForwardSampler.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/ForwardSampler.cpp /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp: In member function 'virtual void LPSolver::outputMathematica(char*) const': /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp:115:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system( instr.c_str() ); ~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp:118:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system( instr2.c_str() ); ~~~~~~^~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/Fido.dir/src/GramSchmidt.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/GramSchmidt.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/GramSchmidt.cpp [ 41%] Building CXX object CMakeFiles/Fido.dir/src/LPSolver.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/LPSolver.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp [ 44%] Building CXX object CMakeFiles/Fido.dir/src/ForwardSampler.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/ForwardSampler.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/ForwardSampler.cpp [ 47%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/Random.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/Random.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Random.cpp [ 50%] Building CXX object CMakeFiles/Fido.dir/src/Random.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/Random.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/Random.cpp /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp: In member function 'virtual void LPSolver::outputMathematica(char*) const': /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp:115:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system( instr.c_str() ); ~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/LPSolver.cpp:118:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system( instr2.c_str() ); ~~~~~~^~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/ProteinIdentifier.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/ProteinIdentifier.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/ProteinIdentifier.cpp [ 55%] Building CXX object CMakeFiles/Fido.dir/src/ProteinIdentifier.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/ProteinIdentifier.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/ProteinIdentifier.cpp [ 58%] Building CXX object CMakeFiles/Fido.dir/src/BasicBigraph.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/BasicBigraph.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/BasicBigraph.cpp [ 61%] Building CXX object CMakeFiles/Fido.dir/src/BasicGroupBigraph.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/Fido.dir/src/BasicGroupBigraph.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/BasicGroupBigraph.cpp [ 63%] Building CXX object CMakeFiles/FidoChooseParameters.dir/src/BasicBigraph.cpp.o /usr/bin/c++ -I/builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -DNDEBUG -Wall -o CMakeFiles/FidoChooseParameters.dir/src/BasicBigraph.cpp.o -c /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/BasicBigraph.cpp /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/BasicBigraph.cpp: In member function 'std::__cxx11::string BasicBigraph::cleanPeptideSequence(std::__cxx11::string) const': /builddir/build/BUILD/Fido-be99c1cea6c5e2cf012fdaef8910176cde9ac2d3/src/BasicBigraph.cpp:24:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0; i