|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectorg.jmol.adapter.smarter.AtomSetCollectionReader
org.jmol.adapter.readers.more.OdysseyXMLReader
public class OdysseyXMLReader
Field Summary | |
---|---|
(package private) int |
atomCount
|
(package private) int |
bondCount
|
(package private) java.lang.String |
modelName
|
Fields inherited from class org.jmol.adapter.smarter.AtomSetCollectionReader |
---|
ANGSTROMS_PER_BOHR, applySymmetryToBonds, atomSetCollection, bsFilter, bsModels, calculationType, doApplySymmetry, filter, getHeader, haveAtomFilter, havePartialChargeFilter, htParams, ignoreFileSymmetryOperators, ignoreFileUnitCell, iHaveSymmetryOperators, iHaveUnitCell, isTrajectory, latticeCells, line, modelNumber, needToApplySymmetry, next, prevline, reader, readerName, spaceGroup, templateAtomCount |
Constructor Summary | |
---|---|
OdysseyXMLReader()
|
Method Summary | |
---|---|
(package private) void |
readAtoms()
|
void |
readAtomSetCollection(java.io.BufferedReader reader)
|
(package private) void |
readBonds()
|
(package private) void |
readDescription()
|
(package private) java.util.Hashtable |
readXML(java.lang.String name)
|
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
---|
java.lang.String modelName
int atomCount
int bondCount
Constructor Detail |
---|
public OdysseyXMLReader()
Method Detail |
---|
public void readAtomSetCollection(java.io.BufferedReader reader)
readAtomSetCollection
in class AtomSetCollectionReader
void readDescription() throws java.lang.Exception
java.lang.Exception
void readAtoms() throws java.lang.Exception
java.lang.Exception
java.util.Hashtable readXML(java.lang.String name) throws java.lang.Exception
java.lang.Exception
void readBonds() throws java.lang.Exception
java.lang.Exception
|
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |